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    LOTGIDRAFT_103922 hypothetical protein [ Lottia gigantea (owl limpet) ]

    Gene ID: 20229800, updated on 28-Dec-2023

    Summary

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    Gene symbol
    LOTGIDRAFT_103922
    Gene description
    hypothetical protein
    Locus tag
    LOTGIDRAFT_103922
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Lottia gigantea
    Lineage
    Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia
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    Genomic context

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    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_008708400.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008708400.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into bilaterian evolution from three spiralian genomes. Simakov O, et al. Nature, 2013 Jan 24. PMID 23254933, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables voltage-gated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of voltage-gated potassium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_008708400.1 Reference assembly

      Range
      6492826..6501317
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009053545.1 → XP_009051793.1  hypothetical protein LOTGIDRAFT_103922 [Lottia gigantea]

      See identical proteins and their annotated locations for XP_009051793.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      V4A286
      Conserved Domains (4) summary
      smart00225
      Location:5 → 102
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00520
      Location:207 → 409
      Ion_trans; Ion transport protein
      pfam02214
      Location:5 → 95
      BTB_2; BTB/POZ domain
      pfam07885
      Location:327 → 405
      Ion_trans_2; Ion channel
    Nucleotide Protein
    Heading Accession and Version

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