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    kdgR DNA-binding transcriptional regulator KdgR [ Vibrio fluvialis ]

    Gene ID: 29383811, updated on 3-Dec-2024

    Summary

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    Gene symbol
    kdgR
    Gene description
    DNA-binding transcriptional regulator KdgR
    Locus tag
    AL536_RS23700
    Gene type
    protein coding
    Organism
    Vibrio fluvialis (strain: ATCC 33809, nat-host: Homo sapiens, culture-collection: FDA:FDAARGOS_104, type-material: type strain of Vibrio fluvialis)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
    Old locus tag
    AL536_01060
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    Genomic context

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    Location:
    chromosome: 1

    1 - NZ_CP014034.2Genomic Context describing neighboring genes Neighboring gene YgjV family protein Neighboring gene 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD Neighboring gene putative nucleotidyltransferase substrate binding domain-containing protein Neighboring gene exonuclease domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP014034.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Specific interactions of Erwinia chrysanthemi KdgR repressor with different operators of genes involved in pectinolysis. Nasser W, et al. J Mol Biol, 1994 Feb 18. PMID 8107132
    2. Purification and functional characterization of the KdgR protein, a major repressor of pectinolysis genes of Erwinia chrysanthemi. Nasser W, et al. Mol Microbiol, 1992 Jan. PMID 1545709
    3. Genetic control of the 2-keto-3-deoxy-d-gluconate metabolism in Escherichia coli K-12: kdg regulon. Pouyssegur J, et al. J Bacteriol, 1974 Feb. PMID 4359651, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DNA-binding transcriptional regulator KdgR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP014034.2 Reference assembly

      Range
      216346..217128
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_032080597.1 MULTISPECIES: DNA-binding transcriptional regulator KdgR [Vibrio]

      UniProtKB/TrEMBL
      A0AAX2LU71
      Conserved Domains (1) summary
      PRK15090
      Location:1 → 257
      PRK15090; DNA-binding transcriptional regulator KdgR; Provisional
    Nucleotide Protein
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