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    rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD [ Cronobacter dublinensis subsp. dublinensis LMG 23823 ]

    Gene ID: 45667767, updated on 11-Dec-2024

    Summary

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    Gene symbol
    rluD
    Gene description
    23S rRNA pseudouridine(1911/1915/1917) synthase RluD
    Locus tag
    AFK67_RS15505
    Gene type
    protein coding
    Organism
    Cronobacter dublinensis subsp. dublinensis LMG 23823 (strain: LMG 23823, sub-species: dublinensis, culture-collection: LMG:23823, type-material: type strain of Cronobacter dublinensis)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Cronobacter
    Old locus tag
    AFK67_15515
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    Genomic context

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    NZ_CP012266.1Genomic Context describing neighboring genes Neighboring gene 16S ribosomal RNA Neighboring gene ATP-dependent chaperone ClpB Neighboring gene purine nucleoside phosphorylase YfiH Neighboring gene lysozyme inhibitor LprI family protein Neighboring gene outer membrane protein assembly factor BamD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP012266.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fully Closed Genome Sequences of Five Type Strains of the Genus Cronobacter and One Cronobacter sakazakii Strain. Moine D, et al. Genome Announc, 2016 Mar 24. PMID 27013041, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    23S rRNA pseudouridine(1911/1915/1917) synthase RluD
    WP_032967437.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP012266.1 Reference assembly

      Range
      3377141..3378121 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_032967437.1 23S rRNA pseudouridine(1911/1915/1917) synthase RluD [Cronobacter dublinensis]

      UniProtKB/TrEMBL
      A0A9Q4XMI1
      Conserved Domains (3) summary
      PRK11180
      Location:1 → 325
      rluD; 23S rRNA pseudouridine synthase D; Provisional
      cd02869
      Location:93 → 286
      PseudoU_synth_RluCD_like; Pseudouridine synthase, RsuA/RluD family
      cd00165
      Location:18 → 97
      S4; S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized ...
    Nucleotide Protein
    Heading Accession and Version

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