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    LOC104376849 liprin-alpha-4-like [ Tauraco erythrolophus (red-crested turaco) ]

    Gene ID: 104376849, updated on 3-Aug-2024

    Summary

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    Gene symbol
    LOC104376849
    Gene description
    liprin-alpha-4-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tauraco erythrolophus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Musophagiformes; Musophagidae; Tauraco
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    Genomic context

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    See LOC104376849 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    100 current ASM70936v1 (GCF_000709365.1) Unplaced Scaffold NW_010059546.1 (2262..18882, complement)

    NW_010059546.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_010059546.1 Unplaced Scaffold Reference ASM70936v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in synapse organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in presynaptic active zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: liprin-alpha-4-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tauraco erythrolophus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM70936v1

    Genomic

    1. NW_010059546.1 Reference ASM70936v1

      Range
      2262..18882 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009983502.1 → XP_009981804.1  LOW QUALITY PROTEIN: liprin-alpha-4-like

      Conserved Domains (4) summary
      cd09562
      Location:414 → 482
      SAM_liprin-alpha1,2,3,4_repeat1; SAM domain of liprin-alpha1,2,3,4 proteins repeat 1
      cd09565
      Location:529 → 594
      SAM_liprin-alpha1,2,3,4_repeat2; SAM domain of liprin-alpha1,2,3,4 proteins repeat 2
      cd09568
      Location:614 → 685
      SAM_liprin-alpha1,2,3,4_repeat3; SAM domain of liprin-alpha1,2,3,4 proteins repeat 3
      smart00454
      Location:615 → 686
      SAM; Sterile alpha motif
    Nucleotide Protein
    Heading Accession and Version

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