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    • Showing Current items.

    Tc00.1047053409101.9 hypothetical protein [ Trypanosoma cruzi ]

    Gene ID: 3531111, updated on 23-Nov-2023

    Summary

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    Gene symbol
    Tc00.1047053409101.9
    Gene description
    hypothetical protein
    Locus tag
    Tc00.1047053409101.9
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trypanosoma cruzi (strain: CL Brener)
    Lineage
    Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum
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    Genomic context

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    See Tc00.1047053409101.9 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_001849189.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L14, putative Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001849189.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020725
    2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Miscellaneous features

    • Loc: c1072-1 areas not merged during assembly with more than two copies in the genome that could not be assigned to a particular haplotype

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein
    XP_802154.1
    • gene with more than two copies in the genome that does not belong to a merged region and that could not be assigned to a particular haplotype

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001849189.1 Reference assembly

      Range
      1..1072 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_797061.1 → XP_802154.1  hypothetical protein, conserved, partial [Trypanosoma cruzi]

      See identical proteins and their annotated locations for XP_802154.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q4CKA6, V5BLU8
      Conserved Domains (3) summary
      COG2319
      Location:2 → 296
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:32 → 77
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:2 → 106
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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