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    C27F2.9 JmjC domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 175673, updated on 27-Dec-2024

    Summary

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    Official Symbol
    C27F2.9
    Official Full Name
    JmjC domain-containing protein
    Primary source
    WormBase:WBGene00043156
    Locus tag
    CELE_C27F2.9
    See related
    AllianceGenome:WB:WBGene00043156
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable cis-regulatory region sequence-specific DNA binding activity. Predicted to be active in nucleus. Orthologous to human JMJD8 (jumonji domain containing 8). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C27F2.9 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    6
    Sequence:
    Chromosome: III; NC_003281.10 (4961817..4963044, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Methyltransferase BUD23 Neighboring gene Vacuolar-sorting protein SNF8 Neighboring gene ncRNA Neighboring gene Ion transport domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    JmjC domain-containing protein
    NP_498053.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      4961817..4963044 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065652.7 → NP_498053.2  JmjC domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498053.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95QU1
      Conserved Domains (1) summary
      cl21464
      Location:183 → 243
      cupin_like; Conserved domain found in cupin and related proteins
    Nucleotide Protein
    Heading Accession and Version

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