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    J0X03_RS18705 YbgC/FadM family acyl-CoA thioesterase [ Serratia ureilytica ]

    Gene ID: 64309653, updated on 3-Dec-2024

    Summary

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    Gene symbol
    J0X03_RS18705
    Gene description
    YbgC/FadM family acyl-CoA thioesterase
    Locus tag
    J0X03_RS18705
    Gene type
    protein coding
    Organism
    Serratia ureilytica (strain: T6, nat-host: soil)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Serratia
    Old locus tag
    J0X03_18705
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    Genomic context

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    NZ_CP071320.1Genomic Context describing neighboring genes Neighboring gene SgrR family transcriptional regulator Neighboring gene 7-cyano-7-deazaguanine synthase QueC Neighboring gene helix-hairpin-helix domain-containing protein Neighboring gene peptidylprolyl isomerase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP071320.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structural and enzymatic characterization of HP0496, a YbgC thioesterase from Helicobacter pylori. Angelini A, et al. Proteins, 2008 Sep. PMID 18338382
    2. A new member of the Escherichia coli fad regulon: transcriptional regulation of fadM (ybaW). Feng Y, et al. J Bacteriol, 2009 Oct. PMID 19684132, Free PMC Article
    3. Emergence of rare carbapenemases (FRI, GES-5, IMI, SFC and SFH-1) in Enterobacterales isolated from surface waters in Japan. Gomi R, et al. J Antimicrob Chemother, 2022 Apr 27. PMID 35137119

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    YbgC/FadM family acyl-CoA thioesterase
    WP_033642075.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP071320.1 Reference assembly

      Range
      3960332..3960733 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_033642075.1 MULTISPECIES: YbgC/FadM family acyl-CoA thioesterase [Serratia]

      See identical proteins and their annotated locations for WP_033642075.1

      UniProtKB/TrEMBL
      A0A8B4G792, A0A9X9C003, A0AAP6VDB8, A0AAV3LZ23
      Conserved Domains (1) summary
      cl00509
      Location:5 → 120
      hot_dog; The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated ...
    Nucleotide Protein
    Heading Accession and Version