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    xerD site-specific tyrosine recombinase XerD [ Pantoea stewartii ]

    Gene ID: 61252554, updated on 3-Dec-2024

    Summary

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    Gene symbol
    xerD
    Gene description
    site-specific tyrosine recombinase XerD
    Locus tag
    G5574_RS09445
    Gene type
    protein coding
    Organism
    Pantoea stewartii (strain: ZJ-FGZX1, nat-host: Dracaena sanderiana)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Pantoea
    Old locus tag
    G5574_09445
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    Genomic context

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    NZ_CP049115.1Genomic Context describing neighboring genes Neighboring gene single-stranded-DNA-specific exonuclease RecJ Neighboring gene bifunctional protein-disulfide isomerase/oxidoreductase DsbC Neighboring gene protein YgfX Neighboring gene flavodoxin FldB Neighboring gene FAD assembly factor SdhE

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP049115.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Xer Site Specific Recombination: Double and Single Recombinase Systems. Castillo F, et al. Front Microbiol, 2017. PMID 28373867, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    site-specific tyrosine recombinase XerD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP049115.1 Reference assembly

      Range
      2002442..2003335 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_033739613.1 MULTISPECIES: site-specific tyrosine recombinase XerD [Pantoea]

      See identical proteins and their annotated locations for WP_033739613.1

      UniProtKB/TrEMBL
      A0AAX1GV36
      Conserved Domains (1) summary
      PRK00283
      Location:1 → 297
      xerD; tyrosine recombinase
    Nucleotide Protein
    Heading Accession and Version