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    DCTN2-p50 Dynactin 2, p50 subunit [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 44086, updated on 9-Dec-2024

    Summary

    Official Symbol
    DCTN2-p50provided by FlyBase
    Official Full Name
    Dynactin 2, p50 subunitprovided by FlyBase
    Primary source
    FLYBASE:FBgn0021825
    Locus tag
    Dmel_CG8269
    See related
    AllianceGenome:FB:FBgn0021825
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG8269; DCTN2; dDyn; Dmel\CG8269; dmn; Dmn; DMN; dyna; Dynamitin; l(2)k16109; l(2)k16218; p50; P50; p50/Dmn; p50/dynamitin; p50[Dmn]
    Summary
    Involved in several processes, including clathrin-dependent endocytosis involved in vitellogenesis; oocyte construction; and positive regulation of retrograde axon cargo transport. Located in cell cortex. Colocalizes with axon cytoplasm. Is expressed in several structures, including adult head; central brain primordium; embryonic/larval midgut; embryonic/larval midgut primordium; and ganglia. Used to study retinal degeneration. Orthologous to human DCTN2 (dynactin subunit 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See DCTN2-p50 in Genome Data Viewer
    Location:
    44F3-44F3; 2-59 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (8891832..8893339)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (4779337..4780844)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Ryanodine receptor Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45202 Neighboring gene Secretory 31 Neighboring gene anastral spindle 2

    Genomic regions, transcripts, and products

    Bibliography

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in centrosome localization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in clathrin-dependent endocytosis involved in vitellogenesis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in mRNA transport IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in microtubule-based process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in mitotic metaphase chromosome alignment ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in mitotic spindle organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitotic spindle organization ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in oocyte microtubule cytoskeleton organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in oogenesis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in phototransduction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in pole plasm oskar mRNA localization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of retrograde axon cargo transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in retrograde axonal transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in spindle organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    colocalizes_with axon cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cell cortex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in centrosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of dynactin complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of dynactin complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of dynactin complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in vesicle ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    dynactin 2, p50 subunit
    Names
    CG8269-PA
    DCTN2-p50-PA
    Dynactin2 p50
    dynamitin
    p50 dynamitin
    p50-dynamitin
    p50/Dynamitin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      8891832..8893339
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079951.3NP_524690.1  dynactin 2, p50 subunit [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524690.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7K2D2
      Related
      FBpp0087722
      Conserved Domains (1) summary
      pfam04912
      Location:16376
      Dynamitin; Dynamitin