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    DACI_RS25850 EAL and HDOD domain-containing protein [ Delftia acidovorans SPH-1 ]

    Gene ID: 24113657, updated on 21-Nov-2024

    Summary

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    Gene symbol
    DACI_RS25850
    Gene description
    EAL and HDOD domain-containing protein
    Locus tag
    DACI_RS25850
    Gene type
    protein coding
    Organism
    Delftia acidovorans SPH-1 (strain: SPH-1)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia
    Old locus tag
    Daci_5114
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    Genomic context

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    Sequence:
    NC_010002.1 (5664860..5666137)

    NC_010002.1Genomic Context describing neighboring genes Neighboring gene gamma carbonic anhydrase family protein Neighboring gene ferritin-like domain-containing protein Neighboring gene EAL and HDOD domain-containing protein Neighboring gene tripartite tricarboxylate transporter substrate binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_010002.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dimerisation induced formation of the active site and the identification of three metal sites in EAL-phosphodiesterases. Bellini D, et al. Sci Rep, 2017 Feb 10. PMID 28186120, Free PMC Article
    2. GGDEF and EAL domains inversely regulate cyclic di-GMP levels and transition from sessility to motility. Simm R, et al. Mol Microbiol, 2004 Aug. PMID 15306016
    3. Structural insight into the mechanism of c-di-GMP hydrolysis by EAL domain phosphodiesterases. Tchigvintsev A, et al. J Mol Biol, 2010 Sep 24. PMID 20691189, Free PMC Article
    4. Mineralization of individual congeners of linear alkylbenzenesulfonate by defined pairs of heterotrophic bacteria. Schleheck D, et al. Appl Environ Microbiol, 2004 Jul. PMID 15240283, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    EAL and HDOD domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_010002.1 Reference assembly

      Range
      5664860..5666137
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_034396453.1 MULTISPECIES: EAL and HDOD domain-containing protein [Delftia]

      See identical proteins and their annotated locations for WP_034396453.1

      UniProtKB/TrEMBL
      A0A210W4Q0, A0A2G6TU27, A0AAJ2VBU1
      Conserved Domains (1) summary
      COG3434
      Location:25 → 388
      YuxH; c-di-GMP-related signal transduction protein, contains EAL and HDOD domains [Signal transduction mechanisms]