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    cas2e type I-E CRISPR-associated endoribonuclease Cas2e [ Shewanella chilikensis ]

    Gene ID: 72199438, updated on 15-Dec-2024

    Summary

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    Gene symbol
    cas2e
    Gene description
    type I-E CRISPR-associated endoribonuclease Cas2e
    Locus tag
    CX651_RS05925
    Gene type
    protein coding
    Organism
    Shewanella chilikensis (strain: JC5, type-material: type strain of Shewanella chilikensis)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella
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    Genomic context

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    NZ_NIJM01000011.1Genomic Context describing neighboring genes Neighboring gene type I-E CRISPR-associated protein Cas5/CasD Neighboring gene type I-E CRISPR-associated protein Cas6/Cse3/CasE Neighboring gene type I-E CRISPR-associated endonuclease Cas1e Neighboring gene penicillin-binding protein 1C Neighboring gene alpha-2-macroglobulin Neighboring gene amino-acid N-acetyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_NIJM01000011.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A novel family of sequence-specific endoribonucleases associated with the clustered regularly interspaced short palindromic repeats. Beloglazova N, et al. J Biol Chem, 2008 Jul 18. PMID 18482976, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type I-E CRISPR-associated endoribonuclease Cas2e

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_NIJM01000011.1 Reference assembly

      Range
      25832..26122
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_039034047.1 MULTISPECIES: type I-E CRISPR-associated endoribonuclease Cas2e [Shewanella]

      UniProtKB/TrEMBL
      A0A379ZXG4, A0A6G7LWJ9
      Conserved Domains (1) summary
      PRK11558
      Location:1 → 96
      PRK11558; putative ssRNA endonuclease; Provisional
    Nucleotide Protein
    Heading Accession and Version