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    NCU01950 pre-mRNA-splicing factor slu-7 [ Neurospora crassa OR74A ]

    Gene ID: 3880383, updated on 6-Jun-2024

    Summary

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    Gene symbol
    NCU01950
    Gene description
    pre-mRNA-splicing factor slu-7
    Locus tag
    NCU01950
    See related
    FungiDB:NCU01950; VEuPathDB:NCU01950
    Gene type
    protein coding
    RNA name
    pre-mRNA-splicing factor slu-7
    RefSeq status
    PROVISIONAL
    Organism
    Neurospora crassa OR74A (strain: OR74A)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora
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    Genomic context

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    See NCU01950 in Genome Data Viewer
    Location:
    other: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_026501.1 (1895466..1896948)

    Linkage Group I - NC_026501.1Genomic Context describing neighboring genes Neighboring gene encodes anonymous transcript-3 Neighboring gene ultraviolet photoreactivation-1 Neighboring gene unknown-16 Neighboring gene 60S ribosomal protein L21 Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_026501.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome sequence of the filamentous fungus Neurospora crassa. Galagan JE, et al. Nature, 2003 Apr 24. PMID 12712197
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables pre-mRNA 3'-splice site binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    pre-mRNA-splicing factor slu-7

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_026501.1 Reference assembly

      Range
      1895466..1896948
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_959141.2 → XP_964234.1  pre-mRNA-splicing factor slu-7 [Neurospora crassa OR74A]

      See identical proteins and their annotated locations for XP_964234.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q7SDY6
      UniProtKB/TrEMBL
      Q27Q98
      Conserved Domains (1) summary
      pfam11708
      Location:137 → 378
      Slu7; Pre-mRNA splicing Prp18-interacting factor
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7SDY6.1

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