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    avrBs2 type III secretion system effector avirulence protein AvrBs2 [ Xanthomonas citri pv. citri ]

    Gene ID: 66909292, updated on 7-May-2024

    Summary

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    Gene symbol
    avrBs2
    Gene description
    type III secretion system effector avirulence protein AvrBs2
    Locus tag
    AMD14_RS00865
    Gene type
    protein coding
    Organism
    Xanthomonas citri pv. citri (strain: MN12, pathovar: citri, nat-host: citrus spp., sub-species: citri)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Xanthomonas
    Old locus tag
    J164_00188; J164_RS00875
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    Genomic context

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    NZ_CP008998.1Genomic Context describing neighboring genes Neighboring gene TonB-dependent receptor Neighboring gene ROK family protein Neighboring gene ribonuclease H-like domain-containing protein Neighboring gene DEAD/DEAH box helicase Neighboring gene hemolysin III family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP008998.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Type III Effector AvrBs2 in Xanthomonas oryzae pv. oryzicola Suppresses Rice Immunity and Promotes Disease Development. Li S, et al. Mol Plant Microbe Interact, 2015 Aug. PMID 25688911
    2. Computational and biochemical analysis of the Xanthomonas effector AvrBs2 and its role in the modulation of Xanthomonas type three effector delivery. Zhao B, et al. PLoS Pathog, 2011 Dec. PMID 22144898, Free PMC Article
    3. Positive selection is the main driving force for evolution of citrus canker-causing Xanthomonas. Zhang Y, et al. ISME J, 2015 Oct. PMID 25689023, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type III secretion system effector avirulence protein AvrBs2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP008998.1 Reference assembly

      Range
      91895..94084
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_040107547.1 MULTISPECIES: type III secretion system effector avirulence protein AvrBs2 [Xanthomonas]

      See identical proteins and their annotated locations for WP_040107547.1

      UniProtKB/TrEMBL
      A0A7S6YX60
      Conserved Domains (1) summary
      pfam03009
      Location:289 → 531
      GDPD; Glycerophosphoryl diester phosphodiesterase family
    Nucleotide Protein
    Heading Accession and Version