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    rho transcription termination factor Rho [ Vibrio metschnikovii ]

    Gene ID: 79886755, updated on 3-Dec-2024

    Summary

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    Gene symbol
    rho
    Gene description
    transcription termination factor Rho
    Locus tag
    DYH36_RS01005
    Gene type
    protein coding
    Organism
    Vibrio metschnikovii (strain: NCTC8443, serovar: not available: to be reported later, type-material: type strain of Vibrio metschnikovii)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
    Old locus tag
    NCTC8443_00202
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    Genomic context

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    NZ_UHIH01000001.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent RNA helicase RhlB Neighboring gene thioredoxin TrxA Neighboring gene 4-hydroxy-3-polyprenylbenzoate decarboxylase Neighboring gene NAD(P)H-flavin reductase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_UHIH01000001.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Rho-dependent terminators and transcription termination. Ciampi MS. Microbiology (Reading), 2006 Sep. PMID 16946247

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    transcription termination factor Rho

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_UHIH01000001.1 Reference assembly

      Range
      231938..233197
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_040905638.1 MULTISPECIES: transcription termination factor Rho [Vibrio]

      UniProtKB/TrEMBL
      A0A9X0UI69, A0AAU6SNK6, A0AAU6SXV5, A0AAU6TH47, A0AAU6UEP5, A0AAU6UQD4, A0AAU6VFU6, A0AAW8GWC9
      Conserved Domains (4) summary
      smart00959
      Location:5 → 47
      Rho_N; Rho termination factor, N-terminal domain
      PRK09376
      Location:1 → 418
      rho; transcription termination factor Rho; Provisional
      cd01128
      Location:156 → 404
      rho_factor; Transcription termination factor rho is a bacterial ATP-dependent RNA/DNA helicase. It is a homohexamer. Each monomer consists of an N-terminal domain of the OB fold, which is responsible for binding to cysteine rich nucleotides. This alignment is of the ...
      pfam07497
      Location:53 → 125
      Rho_RNA_bind; Rho termination factor, RNA-binding domain

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