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    MARHY_RS00620 LysR family transcriptional regulator [ Marinobacter nauticus ATCC 49840 ]

    Gene ID: 31819663, updated on 11-Dec-2024

    Summary

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    Gene symbol
    MARHY_RS00620
    Gene description
    LysR family transcriptional regulator
    Locus tag
    MARHY_RS00620
    Gene type
    protein coding
    Organism
    Marinobacter nauticus ATCC 49840 (strain: ATCC 49840, type-material: type strain of Marinobacter hydrocarbonoclasticus)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Marinobacteraceae; Marinobacter
    Old locus tag
    MARHY0127
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    Genomic context

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    Sequence:
    NC_017067.1 (145041..145949, complement)

    NC_017067.1Genomic Context describing neighboring genes Neighboring gene efflux RND transporter periplasmic adaptor subunit Neighboring gene efflux RND transporter permease subunit Neighboring gene DoxX family protein Neighboring gene class III extradiol ring-cleavage dioxygenase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_017067.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the marine bacterium Marinobacter hydrocarbonoclasticus SP17, which forms biofilms on hydrophobic organic compounds. Grimaud R, et al. J Bacteriol, 2012 Jul. PMID 22689231, Free PMC Article
    2. Molecular biology of the LysR family of transcriptional regulators. Schell MA. Annu Rev Microbiol, 1993. PMID 8257110
    3. Structure and function of the LysR-type transcriptional regulator (LTTR) family proteins. Maddocks SE, et al. Microbiology (Reading), 2008 Dec. PMID 19047729

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    LysR family transcriptional regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_017067.1 Reference assembly

      Range
      145041..145949 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_041654436.1 LysR family transcriptional regulator [Marinobacter nauticus]

      Conserved Domains (2) summary
      cd08422
      Location:92 → 288
      PBP2_CrgA_like; The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain
      pfam00126
      Location:5 → 63
      HTH_1; Bacterial regulatory helix-turn-helix protein, lysR family