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    LOC105455233 sesquipedalian-1-like [ Wasmannia auropunctata (little fire ant) ]

    Gene ID: 105455233, updated on 1-Oct-2024

    Summary

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    Gene symbol
    LOC105455233
    Gene description
    sesquipedalian-1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Wasmannia auropunctata
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Wasmannia
    Orthologs
    honey bee all
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    Genomic context

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    See LOC105455233 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current wasmannia.A_1.0 (GCF_000956235.1) Unplaced Scaffold NW_012026987.1 (141229..142975, complement)

    NW_012026987.1Genomic Context describing neighboring genes Neighboring gene desumoylating isopeptidase 2 Neighboring gene NADH dehydrogenase (ubiquinone) 23 kDa subunit Neighboring gene bridge-like lipid transfer protein family member hobbit Neighboring gene corepressor interacting with RBPJ 1 Neighboring gene ribosomal protein S6 kinase beta-1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012026987.1 Unplaced Scaffold Reference wasmannia.A_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endosome organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in receptor recycling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retrograde transport, endosome to Golgi IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in early endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in recycling endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sesquipedalian-1-like

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Wasmannia auropunctata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference wasmannia.A_1.0

    Genomic

    1. NW_012026987.1 Reference wasmannia.A_1.0

      Range
      141229..142975 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011698401.1 → XP_011696703.1  sesquipedalian-1-like

      See identical proteins and their annotated locations for XP_011696703.1

      Conserved Domains (2) summary
      cd13288
      Location:11 → 130
      PH_Ses; Sesquipedalian family Pleckstrin homology (PH) domain
      pfam00169
      Location:18 → 108
      PH; PH domain

    2. XM_011698400.1 → XP_011696702.1  sesquipedalian-1-like

      See identical proteins and their annotated locations for XP_011696702.1

      Conserved Domains (2) summary
      cd13288
      Location:11 → 130
      PH_Ses; Sesquipedalian family Pleckstrin homology (PH) domain
      pfam00169
      Location:18 → 108
      PH; PH domain

    3. XM_011698404.1 → XP_011696706.1  sesquipedalian-1-like

      See identical proteins and their annotated locations for XP_011696706.1

      Conserved Domains (2) summary
      cd13288
      Location:11 → 130
      PH_Ses; Sesquipedalian family Pleckstrin homology (PH) domain
      pfam00169
      Location:18 → 108
      PH; PH domain

    4. XM_011698403.1 → XP_011696705.1  sesquipedalian-1-like

      See identical proteins and their annotated locations for XP_011696705.1

      Conserved Domains (2) summary
      cd13288
      Location:11 → 130
      PH_Ses; Sesquipedalian family Pleckstrin homology (PH) domain
      pfam00169
      Location:18 → 108
      PH; PH domain

    5. XM_011698399.1 → XP_011696701.1  sesquipedalian-1-like

      See identical proteins and their annotated locations for XP_011696701.1

      Conserved Domains (2) summary
      cd13288
      Location:11 → 130
      PH_Ses; Sesquipedalian family Pleckstrin homology (PH) domain
      pfam00169
      Location:18 → 108
      PH; PH domain

    6. XM_011698398.1 → XP_011696700.1  sesquipedalian-1-like

      See identical proteins and their annotated locations for XP_011696700.1

      Conserved Domains (2) summary
      cd13288
      Location:11 → 130
      PH_Ses; Sesquipedalian family Pleckstrin homology (PH) domain
      pfam00169
      Location:18 → 108
      PH; PH domain
    Nucleotide Protein
    Heading Accession and Version

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