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    CXD86_RS16380 LysR family transcriptional regulator [ Bordetella pertussis ]

    Gene ID: 69603061, updated on 1-Aug-2024

    Summary

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    Gene symbol
    CXD86_RS16380
    Gene description
    LysR family transcriptional regulator
    Locus tag
    CXD86_RS16380
    Gene type
    protein coding
    Organism
    Bordetella pertussis (strain: H640, nat-host: Homo sapiens)
    Lineage
    Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella
    Old locus tag
    CXD86_16325
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    Genomic context

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    NZ_CP025371.1Genomic Context describing neighboring genes Neighboring gene FAD-dependent oxidoreductase Neighboring gene DUF2783 domain-containing protein Neighboring gene homogentisate 1,2-dioxygenase Neighboring gene fumarylacetoacetase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP025371.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The History of Bordetella pertussis Genome Evolution Includes Structural Rearrangement. Weigand MR, et al. J Bacteriol, 2017 Apr 15. PMID 28167525, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    LysR family transcriptional regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP025371.1 Reference assembly

      Range
      3361780..3362688 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_010931314.1 LysR family transcriptional regulator [Bordetella pertussis]

      See identical proteins and their annotated locations for WP_010931314.1

      UniProtKB/TrEMBL
      A0A0E8BKG7, A0A0T7CRU2, A0AAI9J1M0, Q7VUG3
      Conserved Domains (2) summary
      cd08459
      Location:99 → 298
      PBP2_DntR_NahR_LinR_like; The C-terminal substrate binding domain of LysR-type transcriptional regulators that are involved in the catabolism of dinitrotoluene, naphthalene and gamma-hexachlorohexane; contains the type 2 periplasmic binding fold
      pfam00126
      Location:9 → 68
      HTH_1; Bacterial regulatory helix-turn-helix protein, lysR family
    Nucleotide Protein
    Heading Accession and Version