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    PverR02_RS17295 LysR family transcriptional regulator [ Pseudomonas veronii ]

    Gene ID: 47556890, updated on 11-Dec-2024

    Summary

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    Gene symbol
    PverR02_RS17295
    Gene description
    LysR family transcriptional regulator
    Locus tag
    PverR02_RS17295
    Gene type
    protein coding
    Organism
    Pseudomonas veronii (strain: R02, nat-host: Solanum tuberosum)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    Old locus tag
    PverR02_17180
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    Genomic context

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    NZ_CP018420.1Genomic Context describing neighboring genes Neighboring gene PaaI family thioesterase Neighboring gene YghX family hydrolase Neighboring gene class C beta-lactamase Neighboring gene C4-dicarboxylate TRAP transporter large permease protein DctM Neighboring gene TRAP transporter small permease

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP018420.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Long-Chain Alkyl Cyanides: Unprecedented Volatile Compounds Released by Pseudomonas and Micromonospora Bacteria. Montes Vidal D, et al. Angew Chem Int Ed Engl, 2017 Apr 3. PMID 28276609

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    LysR family transcriptional regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP018420.1 Reference assembly

      Range
      3810813..3811691 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_046383640.1 MULTISPECIES: LysR family transcriptional regulator [Pseudomonas]

      UniProtKB/TrEMBL
      A0A5Q2U6F7
      Conserved Domains (2) summary
      cd08484
      Location:95 → 285
      PBP2_LTTR_beta_lactamase; The C-terminal substrate-domain of LysR-type transcriptional regulators for beta-lactamase genes, contains the type 2 periplasmic binding fold
      pfam00126
      Location:8 → 67
      HTH_1; Bacterial regulatory helix-turn-helix protein, lysR family
    Nucleotide Protein
    Heading Accession and Version