U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    PverR02_RS13565 Hcp family type VI secretion system effector [ Pseudomonas veronii ]

    Gene ID: 47556153, updated on 11-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PverR02_RS13565
    Gene description
    Hcp family type VI secretion system effector
    Locus tag
    PverR02_RS13565
    Gene type
    protein coding
    Organism
    Pseudomonas veronii (strain: R02, nat-host: Solanum tuberosum)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    Old locus tag
    PverR02_13455
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help

    NZ_CP018420.1Genomic Context describing neighboring genes Neighboring gene type VI secretion system baseplate subunit TssK Neighboring gene OmpA family protein Neighboring gene type VI secretion system protein TssL, short form Neighboring gene type VI secretion system ATPase TssH Neighboring gene type VI secretion system Vgr family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NZ_CP018420.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The Breadth and Molecular Basis of Hcp-Driven Type VI Secretion System Effector Delivery. Howard SA, et al. mBio, 2021 Jun 29. PMID 34061601, Free PMC Article
    2. Long-Chain Alkyl Cyanides: Unprecedented Volatile Compounds Released by Pseudomonas and Micromonospora Bacteria. Montes Vidal D, et al. Angew Chem Int Ed Engl, 2017 Apr 3. PMID 28276609

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    Hcp family type VI secretion system effector

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP018420.1 Reference assembly

      Range
      2933823..2934314
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_046383733.1 MULTISPECIES: Hcp family type VI secretion system effector [Pseudomonas]

      UniProtKB/TrEMBL
      A0A1D3JZ94, A0A2N7YGK8, A0A7Y1FAE1
      Conserved Domains (1) summary
      TIGR03344
      Location:2 → 160
      VI_effect_Hcp1; type VI secretion system effector, Hcp1 family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases