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    PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase [ Gallus gallus (chicken) ]

    Gene ID: 428607, updated on 3-Dec-2024

    Summary

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    Symbol
    PCMT1provided by CGNC
    Full Name
    protein-L-isoaspartate (D-aspartate) O-methyltransferaseprovided by CGNC
    Primary source
    CGNC:9409
    See related
    Ensembl:ENSGALG00010005540
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See PCMT1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (47902226..47936306)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (47803921..47838082)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene large tumor suppressor kinase 1 Neighboring gene nucleoporin 43 Neighboring gene LDL receptor related protein 11 Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 14C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-L-isoaspartate (D-aspartate) O-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein modification process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein-L-isoaspartate(D-aspartate) O-methyltransferase
    Names
    L-isoaspartyl protein carboxyl methyltransferase
    PIMT
    protein L-isoaspartyl/D-aspartyl methyltransferase
    protein-beta-aspartate methyltransferase
    NP_001026696.1
    XP_046770282.1
    XP_046794948.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031525.2 → NP_001026696.1  protein-L-isoaspartate(D-aspartate) O-methyltransferase

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000063
      UniProtKB/Swiss-Prot
      Q5F3N1
      UniProtKB/TrEMBL
      A0A8V0XPK9
      Related
      ENSGALP00010007821.1, ENSGALT00010013259.1
      Conserved Domains (1) summary
      pfam01135
      Location:8 → 216
      PCMT; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      47902226..47936306
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046938992.1 → XP_046794948.1  protein-L-isoaspartate(D-aspartate) O-methyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0XPK9

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      47803921..47838082
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046914326.1 → XP_046770282.1  protein-L-isoaspartate(D-aspartate) O-methyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0XPK9
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5F3N1.3 GenPept UniProtKB/Swiss-Prot:Q5F3N1

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