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    U6958_RS08755 LytTR family DNA-binding domain-containing protein [ Delftia lacustris ]

    Gene ID: 94690684, updated on 23-Nov-2024

    Summary

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    Gene symbol
    U6958_RS08755
    Gene description
    LytTR family DNA-binding domain-containing protein
    Locus tag
    U6958_RS08755
    Gene type
    protein coding
    Organism
    Delftia lacustris (strain: DSM 21246, culture-collection: DSM:21246, type-material: type strain of Delftia lacustris)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia
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    Genomic context

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    NZ_CP141274.1Genomic Context describing neighboring genes Neighboring gene Rid family detoxifying hydrolase Neighboring gene aminotransferase class V-fold PLP-dependent enzyme Neighboring gene sensor histidine kinase Neighboring gene argininosuccinate lyase Neighboring gene Bug family tripartite tricarboxylate transporter substrate binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP141274.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A novel type of conserved DNA-binding domain in the transcriptional regulators of the AlgR/AgrA/LytR family. Nikolskaya AN, et al. Nucleic Acids Res, 2002 Jun 1. PMID 12034833, Free PMC Article
    2. Structural classification of bacterial response regulators: diversity of output domains and domain combinations. Galperin MY. J Bacteriol, 2006 Jun. PMID 16740923, Free PMC Article
    3. LCMS-Metabolomic Profiling and Genome Mining of Delftia lacustris DSM 21246 Revealed Lipophilic Delftibactin Metallophores. Ahmed MMA, et al. J Nat Prod, 2024 May 24. PMID 38739531,

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    LytTR family DNA-binding domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP141274.1 Reference assembly

      Range
      1607277..1608038 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_047326600.1 MULTISPECIES: LytTR family DNA-binding domain-containing protein [Delftia]

      See identical proteins and their annotated locations for WP_047326600.1

      UniProtKB/TrEMBL
      A0A1H3GWK7, A0AAJ1I001
    Nucleotide Protein
    Heading Accession and Version