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    TTHERM_00486070 non-SMC mitotic condensation complex subunit 1, amine-terminal protein [ Tetrahymena thermophila SB210 ]

    Gene ID: 7831118, updated on 28-Dec-2023

    Summary

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    Gene symbol
    TTHERM_00486070
    Gene description
    non-SMC mitotic condensation complex subunit 1, amine-terminal protein
    Locus tag
    TTHERM_00486070
    Gene type
    protein coding
    RNA name
    non-SMC mitotic condensation complex subunit 1, amine-terminal protein
    RefSeq status
    PROVISIONAL
    Organism
    Tetrahymena thermophila SB210 (strain: SB210)
    Lineage
    Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena
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    Genomic context

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    See TTHERM_00486070 in Genome Data Viewer
    Exon count:
    12

    NW_002476301.1Genomic Context describing neighboring genes Neighboring gene MFS transporter Neighboring gene kinesin motor catalytic domain protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_002476301.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in meiotic chromosome condensation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic chromosome condensation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in condensed chromosome, centromeric region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    non-SMC mitotic condensation complex subunit 1, amine-terminal protein
    XP_001032820.2
    • encoded by transcript TTHERM_00486070A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_002476301.1 Reference assembly

      Range
      125768..130746 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001032820.3 → XP_001032820.2  non-SMC mitotic condensation complex subunit 1, amine-terminal protein [Tetrahymena thermophila SB210]

      See identical proteins and their annotated locations for XP_001032820.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      I7M6G4
      Conserved Domains (3) summary
      COG5098
      Location:142 → 1215
      COG5098; Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics / Cell division and chromosome partitioning]
      pfam12717
      Location:1032 → 1204
      Cnd1; non-SMC mitotic condensation complex subunit 1
      pfam12922
      Location:99 → 224
      Cnd1_N; non-SMC mitotic condensation complex subunit 1, N-term
    Nucleotide Protein
    Heading Accession and Version

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