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    fgf19 fibroblast growth factor 19 [ Clupea harengus (Atlantic herring) ]

    Gene ID: 105889059, updated on 19-Nov-2024

    Summary

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    Gene symbol
    fgf19
    Gene description
    fibroblast growth factor 19
    See related
    Ensembl:ENSCHAG00020025352
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Clupea harengus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
    Orthologs
    human zebrafish all
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    Genomic context

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    See fgf19 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current Ch_v2.0.2 (GCF_900700415.2) 6 NC_045157.1 (24993227..24998356)

    Chromosome 6 - NC_045157.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116220722 Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene uncharacterized LOC105889048 Neighboring gene uncharacterized LOC122132942 Neighboring gene LTO1 maturation factor of ABCE1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045157.1 Chromosome 6 Reference Ch_v2.0.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fibroblast growth factor receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in animal organ morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fibroblast growth factor receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    fibroblast growth factor 19

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ch_v2.0.2 Primary Assembly

    Genomic

    1. NC_045157.1 Reference Ch_v2.0.2 Primary Assembly

      Range
      24993227..24998356
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031569526.1 → XP_031425386.1  fibroblast growth factor 19 isoform X2

      UniProtKB/TrEMBL
      A0A6P8FP74
      Conserved Domains (1) summary
      cl00060
      Location:15 → 139
      FGF; Acidic and basic fibroblast growth factor family; FGFs are mitogens, which stimulate growth or differentiation of cells of mesodermal or neuroectodermal origin. The family plays essential roles in patterning and differentiation during vertebrate ...

    2. XM_031569525.1 → XP_031425385.1  fibroblast growth factor 19 isoform X1

      UniProtKB/TrEMBL
      A0A6P3VFL7
      Conserved Domains (1) summary
      cl00060
      Location:39 → 163
      FGF; Acidic and basic fibroblast growth factor family; FGFs are mitogens, which stimulate growth or differentiation of cells of mesodermal or neuroectodermal origin. The family plays essential roles in patterning and differentiation during vertebrate ...

    3. XM_012814818.2 → XP_012670272.1  fibroblast growth factor 19 isoform X1

      UniProtKB/TrEMBL
      A0A6P3VFL7
      Related
      ENSCHAP00020058091.1, ENSCHAT00020062500.1
      Conserved Domains (1) summary
      cl00060
      Location:39 → 163
      FGF; Acidic and basic fibroblast growth factor family; FGFs are mitogens, which stimulate growth or differentiation of cells of mesodermal or neuroectodermal origin. The family plays essential roles in patterning and differentiation during vertebrate ...
    Nucleotide Protein
    Heading Accession and Version

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