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    LA348_RS23210 type II toxin-antitoxin system Phd/YefM family antitoxin [ Citrobacter amalonaticus ]

    Gene ID: 93036217, updated on 23-Aug-2024

    Summary

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    Gene symbol
    LA348_RS23210
    Gene description
    type II toxin-antitoxin system Phd/YefM family antitoxin
    Locus tag
    LA348_RS23210
    Gene type
    protein coding
    Organism
    Citrobacter amalonaticus (strain: FDAARGOS_1489, culture-collection: DSM:4593, type-material: type strain of Citrobacter amalonaticus)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter
    Old locus tag
    LA348_23210
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    Genomic context

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    Location:
    plasmid: unnamed1

    NZ_CP083652.1Genomic Context describing neighboring genes Neighboring gene Y-family DNA polymerase Neighboring gene translesion error-prone DNA polymerase V autoproteolytic subunit Neighboring gene pseudo Neighboring gene type II toxin-antitoxin system RelE/ParE family toxin Neighboring gene helix-turn-helix domain-containing protein Neighboring gene MFS transporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP083652.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An intrinsically disordered entropic switch determines allostery in Phd-Doc regulation. Garcia-Pino A, et al. Nat Chem Biol, 2016 Jul. PMID 27159580
    2. Corepression of the P1 addiction operon by Phd and Doc. Magnuson R, et al. J Bacteriol, 1998 Dec. PMID 9829946, Free PMC Article
    3. Doc of prophage P1 is inhibited by its antitoxin partner Phd through fold complementation. Garcia-Pino A, et al. J Biol Chem, 2008 Nov 7. PMID 18757857, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type II toxin-antitoxin system Phd/YefM family antitoxin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP083652.1 Reference assembly

      Range
      96402..96650 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_048030981.1 MULTISPECIES: type II toxin-antitoxin system Phd/YefM family antitoxin [Enterobacteriaceae]

      See identical proteins and their annotated locations for WP_048030981.1

    Nucleotide Protein
    Heading Accession and Version