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    rluF 23S rRNA pseudouridine(2604) synthase RluF [ Vibrio crassostreae ]

    Gene ID: 93899294, updated on 14-Oct-2024

    Summary

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    Gene symbol
    rluF
    Gene description
    23S rRNA pseudouridine(2604) synthase RluF
    Locus tag
    OC193_RS04035
    Gene type
    protein coding
    Organism
    Vibrio crassostreae (strain: LMG 22240, culture-collection: BCCM/LMG:22240, type-material: type strain of Vibrio crassostreae)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
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    Genomic context

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    Location:
    chromosome: 1

    1 - NZ_AP025476.1Genomic Context describing neighboring genes Neighboring gene bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA Neighboring gene Cys-tRNA(Pro) deacylase Neighboring gene DNA endonuclease SmrA Neighboring gene DUF3149 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_AP025476.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pseudouridine in the Anticodon of Escherichia coli tRNATyr(QΨA) Is Catalyzed by the Dual Specificity Enzyme RluF. Addepalli B, et al. J Biol Chem, 2016 Oct 14. PMID 27551044, Free PMC Article
    2. Identification and site of action of the remaining four putative pseudouridine synthases in Escherichia coli. Del Campo M, et al. RNA, 2001 Nov. PMID 11720289, Free PMC Article
    3. Vibrio Clade 3.0: New Vibrionaceae Evolutionary Units Using Genome-Based Approach. Jiang C, et al. Curr Microbiol, 2021 Dec 14. PMID 34905112

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    23S rRNA pseudouridine(2604) synthase RluF
    WP_048659785.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_AP025476.1 Reference assembly

      Range
      857440..858573 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_048659785.1 MULTISPECIES: 23S rRNA pseudouridine(2604) synthase RluF [Vibrio]

      See identical proteins and their annotated locations for WP_048659785.1

    Nucleotide Protein
    Heading Accession and Version