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    uidC outer membrane porin family protein UidC [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944820, updated on 3-Dec-2024

    Summary

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    Official Symbol
    uidC
    Official Full Name
    outer membrane porin family protein UidC
    Primary source
    ECOCYC:G6866
    Locus tag
    b1615
    See related
    ASAP:ABE-0005405
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1610; gusC
    Summary
    UidC(GusC) is related to the PorD porin of P. aeruginosa. [More information is available at EcoGene: EG12668]. The uidC gene is part of the uidABC operon. [More information is available at EcoCyc: G6866].
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    Genomic context

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    Sequence:
    NC_000913.3 (1691586..1692851, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene mannose-6-phosphate isomerase Neighboring gene DUF945 domain-containing protein YdgA Neighboring gene glucuronide:H(+) symporter Neighboring gene beta-glucuronidase Neighboring gene DNA-binding transcriptional repressor UidR

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The gusBC genes of Escherichia coli encode a glucuronide transport system. Liang WJ, et al. J Bacteriol, 2005 Apr. PMID 15774881, Free PMC Article
    2. Cloning and endonuclease restriction analysis of uidA and uidR genes in Escherichia coli K-12: determination of transcription direction for the uidA gene. Blanco C, et al. J Bacteriol, 1982 Feb. PMID 6276362, Free PMC Article
    3. Fishing new proteins in the twilight zone of genomes: the test case of outer membrane proteins in Escherichia coli K12, Escherichia coli O157:H7, and other Gram-negative bacteria. Casadio R, et al. Protein Sci, 2003 Jun. PMID 12761386, Free PMC Article
    4. BOMP: a program to predict integral beta-barrel outer membrane proteins encoded within genomes of Gram-negative bacteria. Berven FS, et al. Nucleic Acids Res, 2004 Jul 1. PMID 15215418, Free PMC Article
    5. TCDB: the Transporter Classification Database for membrane transport protein analyses and information. Saier MH Jr, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381841, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on mature peptide
      Title: The gusBC genes of Escherichia coli encode a glucuronide transport system.
    2. Isolation, function, and mapping of the gene in a naturally-occuring E. coli strain.
      Title: The gusBC genes of Escherichia coli encode a glucuronide transport system.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables porin activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cell outer membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cell outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of pore complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    outer membrane porin family protein UidC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1691586..1692851 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416132.2 outer membrane porin family protein UidC [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416132.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377DTG3
      Conserved Domains (1) summary
      PRK11379
      Location:5 → 421
      PRK11379; putative outer membrane porin protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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