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    zfyve1 zinc finger, FYVE domain containing 1 [ Oreochromis niloticus (Nile tilapia) ]

    Gene ID: 100698556, updated on 8-Mar-2024

    Summary

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    Gene symbol
    zfyve1
    Gene description
    zinc finger, FYVE domain containing 1
    See related
    Ensembl:ENSONIG00000000754
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oreochromis niloticus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
    Orthologs
    human zebrafish all
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    Genomic context

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    See zfyve1 in Genome Data Viewer
    Location:
    chromosome: LG15
    Exon count:
    15
    Annotation release Status Assembly LG Location
    104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG15 NC_031980.2 (5872495..5879232)
    103 previous assembly ASM185804v2 (GCF_001858045.1) LG15 NC_031980.1 (33560098..33567055, complement)

    Linkage Group LG15 - NC_031980.2Genomic Context describing neighboring genes Neighboring gene VPS18 core subunit of CORVET and HOPS complexes Neighboring gene ras homolog family member V Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class H Neighboring gene WD repeat domain 21 Neighboring gene double PHD fingers 3 Neighboring gene linkage group 15 C6orf58 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger FYVE domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference O_niloticus_UMD_NMBU Primary Assembly

    Genomic

    1. NC_031980.2 Reference O_niloticus_UMD_NMBU Primary Assembly

      Range
      5872495..5879232
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019345915.2 → XP_019201460.1  zinc finger FYVE domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      I3IWG2
      Related
      ENSONIP00000000952.2, ENSONIT00000000951.2

    2. XM_005449694.4 → XP_005449751.1  zinc finger FYVE domain-containing protein 1 isoform X2

      See identical proteins and their annotated locations for XP_005449751.1

      UniProtKB/TrEMBL
      I3IWG2
      Conserved Domains (3) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 770
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl22851
      Location:593 → 654
      PHD_SF; PHD finger superfamily

    3. XM_013268794.3 → XP_013124248.1  zinc finger FYVE domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      I3IWG2, I3IWG3
      Related
      ENSONIP00000000953.2, ENSONIT00000000952.2
      Conserved Domains (3) summary
      cd01851
      Location:185 → 421
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:722 → 782
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl22851
      Location:605 → 666
      PHD_SF; PHD finger superfamily

    4. XM_003440632.5 → XP_003440680.2  zinc finger FYVE domain-containing protein 1 isoform X2

      See identical proteins and their annotated locations for XP_003440680.2

      UniProtKB/TrEMBL
      I3IWG2
      Conserved Domains (3) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 770
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl22851
      Location:593 → 654
      PHD_SF; PHD finger superfamily

    5. XM_005449692.4 → XP_005449749.1  zinc finger FYVE domain-containing protein 1 isoform X2

      See identical proteins and their annotated locations for XP_005449749.1

      UniProtKB/TrEMBL
      I3IWG2
      Conserved Domains (3) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 770
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl22851
      Location:593 → 654
      PHD_SF; PHD finger superfamily

    6. XM_013268795.3 → XP_013124249.1  zinc finger FYVE domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      I3IWG2
      Related
      ENSONIP00000071987.1, ENSONIT00000075486.1
      Conserved Domains (3) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 770
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl22851
      Location:593 → 654
      PHD_SF; PHD finger superfamily

    7. XM_005449693.4 → XP_005449750.1  zinc finger FYVE domain-containing protein 1 isoform X2

      See identical proteins and their annotated locations for XP_005449750.1

      UniProtKB/TrEMBL
      I3IWG2
      Conserved Domains (3) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 770
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl22851
      Location:593 → 654
      PHD_SF; PHD finger superfamily
    Nucleotide Protein
    Heading Accession and Version

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