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    DJ58_RS11470 cupin domain-containing protein [ Yersinia frederiksenii ATCC 33641 ]

    Gene ID: 57905646, updated on 6-Aug-2024

    Summary

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    Gene symbol
    DJ58_RS11470
    Gene description
    cupin domain-containing protein
    Locus tag
    DJ58_RS11470
    Gene type
    protein coding
    Organism
    Yersinia frederiksenii ATCC 33641 (strain: ATCC 33641, culture-collection: ATCC:33641, type-material: type strain of Yersinia frederiksenii)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia
    Old locus tag
    DJ58_86
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    Genomic context

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    NZ_KN150731.1Genomic Context describing neighboring genes Neighboring gene pirin family protein Neighboring gene NAD(P)-dependent alcohol dehydrogenase Neighboring gene carboxymuconolactone decarboxylase family protein Neighboring gene aldo/keto reductase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_KN150731.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Whole-Genome Yersinia sp. Assemblies from 10 Diverse Strains. Daligault HE, et al. Genome Announc, 2014 Oct 23. PMID 25342679, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    cupin domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_KN150731.1 Reference assembly

      Range
      2315558..2316028 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_050413900.1 cupin domain-containing protein [Yersinia frederiksenii]

      UniProtKB/TrEMBL
      A0A380PUG4
      Conserved Domains (1) summary
      COG1917
      Location:27 → 150
      QdoI; Cupin domain protein related to quercetin dioxygenase [General function prediction only]

    Gene LinkOut

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    Molecular Biology Databases