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    LOC106467338 cytosolic Fe-S cluster assembly factor narfl-like [ Limulus polyphemus (Atlantic horseshoe crab) ]

    Gene ID: 106467338, updated on 1-Jul-2024

    Summary

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    Gene symbol
    LOC106467338
    Gene description
    cytosolic Fe-S cluster assembly factor narfl-like
    See related
    EnsemblRapid:LOC106467338
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Limulus polyphemus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Merostomata; Xiphosura; Limulidae; Limulus
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC106467338 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    101 current Limulus_polyphemus-2.1.2 (GCF_000517525.1) Unplaced Scaffold NW_013668186.1 (45984..86919)

    NW_013668186.1Genomic Context describing neighboring genes Neighboring gene mismatch repair endonuclease PMS2 Neighboring gene uncharacterized LOC111087746

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_013668186 Unplaced Scaffold Reference Limulus_polyphemus-2.1.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in iron-sulfur cluster assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic [4Fe-4S] assembly targeting complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytosolic Fe-S cluster assembly factor narfl-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Limulus polyphemus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Limulus_polyphemus-2.1.2 Primary Assembly

    Genomic

    1. NW_013668186.1 Reference Limulus_polyphemus-2.1.2 Primary Assembly

      Range
      45984..86919
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022395499.1 → XP_022251207.1  cytosolic Fe-S cluster assembly factor narfl-like isoform X3

      Related
      XP_022251207.1, XM_022395499.1
      Conserved Domains (2) summary
      smart00902
      Location:374 → 422
      Fe_hyd_SSU; Iron hydrogenase small subunit
      pfam02906
      Location:65 → 358
      Fe_hyd_lg_C; Iron only hydrogenase large subunit, C-terminal domain

    2. XM_013927683.2 → XP_013783137.1  cytosolic Fe-S cluster assembly factor narfl-like isoform X1

      Related
      XP_013783137.1, XM_013927683.2
      Conserved Domains (3) summary
      smart00902
      Location:422 → 470
      Fe_hyd_SSU; Iron hydrogenase small subunit
      COG4624
      Location:60 → 466
      Nar1; Iron only hydrogenase large subunit, C-terminal domain [Energy production and conversion]
      pfam02906
      Location:113 → 409
      Fe_hyd_lg_C; Iron only hydrogenase large subunit, C-terminal domain

    3. XM_022395496.1 → XP_022251204.1  cytosolic Fe-S cluster assembly factor narfl-like isoform X2

      Related
      XP_022251204.1, XM_022395496.1
      Conserved Domains (2) summary
      smart00902
      Location:419 → 467
      Fe_hyd_SSU; Iron hydrogenase small subunit
      pfam02906
      Location:113 → 403
      Fe_hyd_lg_C; Iron only hydrogenase large subunit, C-terminal domain

    4. XM_013927684.2 → XP_013783138.1  cytosolic Fe-S cluster assembly factor narfl-like isoform X3

      Related
      XP_013783138.1, XM_013927684.2
      Conserved Domains (2) summary
      smart00902
      Location:374 → 422
      Fe_hyd_SSU; Iron hydrogenase small subunit
      pfam02906
      Location:65 → 358
      Fe_hyd_lg_C; Iron only hydrogenase large subunit, C-terminal domain

    5. XM_022395498.1 → XP_022251206.1  cytosolic Fe-S cluster assembly factor narfl-like isoform X3

      Related
      XP_022251206.1, XM_022395498.1
      Conserved Domains (2) summary
      smart00902
      Location:374 → 422
      Fe_hyd_SSU; Iron hydrogenase small subunit
      pfam02906
      Location:65 → 358
      Fe_hyd_lg_C; Iron only hydrogenase large subunit, C-terminal domain

    6. XM_022395497.1 → XP_022251205.1  cytosolic Fe-S cluster assembly factor narfl-like isoform X3

      Related
      XP_022251205.1, XM_022395497.1
      Conserved Domains (2) summary
      smart00902
      Location:374 → 422
      Fe_hyd_SSU; Iron hydrogenase small subunit
      pfam02906
      Location:65 → 358
      Fe_hyd_lg_C; Iron only hydrogenase large subunit, C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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