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    HPODL_04131 Condensin complex subunit 1 [ Ogataea parapolymorpha DL-1 ]

    Gene ID: 25773561, updated on 30-Dec-2023

    Summary

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    Gene symbol
    HPODL_04131
    Gene description
    Condensin complex subunit 1
    Locus tag
    HPODL_04131
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ogataea parapolymorpha DL-1 (strain: DL-1, type-material: holotype of Candida parapolymorpha)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Ogataea
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    Genomic context

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    See HPODL_04131 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    1
    Sequence:
    Chromosome: V; NC_027862.1 (659388..662834, complement)

    Chromosome V - NC_027862.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Ferrochelatase, mitochondrial Neighboring gene hypothetical protein Neighboring gene Transcription initiation factor TFIID subunit 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_027862.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in meiotic chromosome condensation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic chromosome condensation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in condensed chromosome, centromeric region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Condensin complex subunit 1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_027862.1 Reference assembly

      Range
      659388..662834 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014078915.1 → XP_013934390.1  Condensin complex subunit 1 [Ogataea parapolymorpha DL-1]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      W1QBV8
      Conserved Domains (2) summary
      COG5098
      Location:5 → 1108
      COG5098; Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics / Cell division and chromosome partitioning]
      sd00044
      Location:894 → 922
      HEAT; HEAT repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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