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    tspan31 tetraspanin 31 [ Austrofundulus limnaeus ]

    Gene ID: 106527628, updated on 13-Mar-2024

    Summary

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    Gene symbol
    tspan31
    Gene description
    tetraspanin 31
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Austrofundulus limnaeus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
    Orthologs
    human zebrafish all
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    Genomic context

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    See tspan31 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952737.1 (193929..214473)

    NW_013952737.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 39 Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 Neighboring gene membrane-associated ring finger (C3HC4) 9 Neighboring gene natural resistance-associated macrophage protein 2-like Neighboring gene uncharacterized LOC106527625

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_013952737.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tetraspanin-31

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Austrofundulus_limnaeus-1.0

    Genomic

    1. NW_013952737.1 Reference Austrofundulus_limnaeus-1.0

      Range
      193929..214473
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014022559.1 → XP_013878013.1  tetraspanin-31

      UniProtKB/TrEMBL
      A0A2I4CDE6
      Conserved Domains (1) summary
      pfam00335
      Location:8 → 201
      Tetraspannin; Tetraspanin family
    Nucleotide Protein
    Heading Accession and Version

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