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    algR alginate biosynthesis regulator AlgR [ Pseudomonas paraeruginosa ]

    Gene ID: 77223795, updated on 12-Dec-2024

    Summary

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    Gene symbol
    algR
    Gene description
    alginate biosynthesis regulator AlgR
    Locus tag
    B7D75_RS27260
    Gene type
    protein coding
    Organism
    Pseudomonas paraeruginosa (strain: Cr1)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    Old locus tag
    B7D75_27275
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    Genomic context

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    NZ_CP020560.1Genomic Context describing neighboring genes Neighboring gene heme biosynthesis protein HemY Neighboring gene uroporphyrinogen-III C-methyltransferase Neighboring gene uroporphyrinogen-III synthase Neighboring gene hydroxymethylbilane synthase Neighboring gene alginate biosynthesis two-component system sensor histidine kinase AlgZ Neighboring gene argininosuccinate lyase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP020560.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pseudomonas aeruginosa AlgR Phosphorylation Status Differentially Regulates Pyocyanin and Pyoverdine Production. Little AS, et al. mBio, 2018 Jan 30. PMID 29382736, Free PMC Article
    2. The Pseudomonas transcriptional regulator AlgR controls LipA expression via the noncoding RNA RsmZ in Pseudomonas protegens Pf-5. Li M, et al. Biochem Biophys Res Commun, 2017 May 20. PMID 28400281
    3. Expression analysis of the Pseudomonas aeruginosa AlgZR two-component regulatory system. Pritchett CL, et al. J Bacteriol, 2015 Feb 15. PMID 25488298, Free PMC Article
    4. VFDB: a reference database for bacterial virulence factors. Chen L, et al. Nucleic Acids Res, 2005 Jan 1. PMID 15608208, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    alginate biosynthesis regulator AlgR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP020560.1 Reference assembly

      Range
      5763052..5763798 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_003157680.1 MULTISPECIES: alginate biosynthesis regulator AlgR [Pseudomonas aeruginosa group]

      See identical proteins and their annotated locations for WP_003157680.1

      UniProtKB/TrEMBL
      A0A2R3J4J8, A6VE38
      Conserved Domains (1) summary
      COG3279
      Location:1 → 248
      LytT; DNA-binding response regulator, LytR/AlgR family [Transcription, Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version