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    SNX33 sorting nexin 33 [ Pseudopodoces humilis (Tibetan ground-tit) ]

    Gene ID: 102113175, updated on 3-Aug-2024

    Summary

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    Gene symbol
    SNX33
    Gene description
    sorting nexin 33
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pseudopodoces humilis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Pseudopodoces
    Orthologs
    human mouse all
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    Genomic context

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    See SNX33 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current PseHum1.0 (GCF_000331425.1) Unplaced Scaffold NW_005087564.1 (2074915..2107438)

    NW_005087564.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase non-receptor type 9 Neighboring gene snurportin 1 Neighboring gene chondroitin sulfate proteoglycan 4 Neighboring gene leucine rich repeat and Ig domain containing 1 Neighboring gene high mobility group 20A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_005087564.1 Unplaced Scaffold Reference PseHum1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cleavage furrow formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endosomal transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cytokinesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in plasma membrane tubulation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorting nexin-33

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pseudopodoces humilis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PseHum1.0 Primary Assembly

    Genomic

    1. NW_005087564.1 Reference PseHum1.0 Primary Assembly

      Range
      2074915..2107438
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014251218.1 → XP_014106693.1  sorting nexin-33 isoform X2

      Conserved Domains (3) summary
      cd11896
      Location:4 → 58
      SH3_SNX33; Src Homology 3 domain of Sorting Nexin 33
      cl02563
      Location:220 → 344
      PX_domain; The Phox Homology domain, a phosphoinositide binding module
      cl12013
      Location:355 → 481
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    2. XM_005521385.2 → XP_005521442.1  sorting nexin-33 isoform X1

      Conserved Domains (3) summary
      cd07669
      Location:355 → 561
      BAR_SNX33; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 33
      cd11896
      Location:4 → 58
      SH3_SNX33; Src Homology 3 domain of Sorting Nexin 33
      cl02563
      Location:220 → 344
      PX_domain; The Phox Homology domain, a phosphoinositide binding module
    Nucleotide Protein
    Heading Accession and Version

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