U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    gspD type II secretion system secretin GspD [ Pseudoalteromonas shioyasakiensis ]

    Gene ID: 29848541, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    gspD
    Gene description
    type II secretion system secretin GspD
    Locus tag
    PASHI_RS01675
    Gene type
    protein coding
    Organism
    Pseudoalteromonas shioyasakiensis (strain: JCM 18891, type-material: type strain of Pseudoalteromonas shioyasakiensis)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help

    NZ_LRUE01000003.1Genomic Context describing neighboring genes Neighboring gene type II secretion system major pseudopilin GspG Neighboring gene type II secretion system inner membrane protein GspF Neighboring gene type II secretion system ATPase GspE Neighboring gene type II secretion system protein GspC Neighboring gene ribosome-associated heat shock protein Hsp15

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NZ_LRUE01000003.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Crystal structure of the N-terminal domain of the secretin GspD from ETEC determined with the assistance of a nanobody. Korotkov KV, et al. Structure, 2009 Feb 13. PMID 19217396, Free PMC Article
    2. Novel virulence-associated type II secretion system unique to high-pathogenicity Yersinia enterocolitica. Iwobi A, et al. Infect Immun, 2003 Apr. PMID 12654803, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    type II secretion system secretin GspD

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_LRUE01000003.1 Reference assembly

      Range
      18192..20255 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_054564049.1 MULTISPECIES: type II secretion system secretin GspD [Pseudoalteromonas]

      UniProtKB/TrEMBL
      A0A0Q0ILZ7, A0AAX2TVF1
      Conserved Domains (1) summary
      TIGR02517
      Location:37 → 629
      type_II_gspD; type II secretion system protein D
    Nucleotide Protein
    Heading Accession and Version