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    ccdc117 coiled-coil domain containing 117 [ Xiphophorus maculatus (southern platyfish) ]

    Gene ID: 102221970, updated on 10-Mar-2024

    Summary

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    Gene symbol
    ccdc117
    Gene description
    coiled-coil domain containing 117
    See related
    Ensembl:ENSXMAG00000017910
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xiphophorus maculatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
    Orthologs
    human zebrafish all
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    Genomic context

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    See ccdc117 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current X_maculatus-5.0-male (GCF_002775205.1) 12 NC_036454.1 (17514920..17518748)
    101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372180.1 (6986381..6988963)

    Chromosome 12 - NC_036454.1Genomic Context describing neighboring genes Neighboring gene deoxycytidine kinase-like Neighboring gene protein MLP1-like Neighboring gene transcobalamin II Neighboring gene oxysterol binding protein 2b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    coiled-coil domain-containing protein 117

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference X_maculatus-5.0-male Primary Assembly

    Genomic

    1. NC_036454.1 Reference X_maculatus-5.0-male Primary Assembly

      Range
      17514920..17518748
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023343902.1 → XP_023199670.1  coiled-coil domain-containing protein 117 isoform X2

      Conserved Domains (1) summary
      pfam15810
      Location:113 → 251
      CCDC117; Coiled-coil domain-containing protein 117

    2. XM_014468966.2 → XP_014324452.1  coiled-coil domain-containing protein 117 isoform X1

      UniProtKB/TrEMBL
      M4AU01
      Related
      ENSXMAP00000017946.2, ENSXMAT00000017972.2
      Conserved Domains (1) summary
      pfam15810
      Location:113 → 243
      CCDC117; Coiled-coil domain-containing protein 117
    Nucleotide Protein Strain
    Heading Accession and Version

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