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    T27A1.3 F-box domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173444, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T27A1.3
    Official Full Name
    F-box domain-containing protein
    Primary source
    WormBase:WBGene00020835
    Locus tag
    CELE_T27A1.3
    See related
    AllianceGenome:WB:WBGene00020835
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T27A1.3 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    6
    Sequence:
    Chromosome: II; NC_003280.10 (535526..546944)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Amino acid transporter transmembrane domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Neurotransmitter-gated ion-channel ligand-binding domain-containing protein Neighboring gene F-box associated domain-containing protein Neighboring gene Molting protein mlt-10 Neighboring gene LIPaSe related;Triacylglycerol lipase Neighboring gene Sodium-and chloride-dependent glycine transporter 2 Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    F-box domain-containing protein
    NP_001303784.1
    • Confirmed by transcript evidence
    NP_001303792.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      535526..546944
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001316863.2 → NP_001303792.1  F-box domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0M7RDQ3
      Conserved Domains (1) summary
      pfam07735
      Location:240 → 304
      FBA_2; F-box associated

    2. NM_001316855.3 → NP_001303784.1  F-box domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0M7RF51
      Conserved Domains (1) summary
      pfam07735
      Location:240 → 304
      FBA_2; F-box associated
    Nucleotide Protein
    Heading Accession and Version

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