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    CNM01160 signal transducer, putative [ Cryptococcus neoformans var. neoformans JEC21 ]

    Gene ID: 3255078, updated on 17-May-2024

    Summary

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    Gene symbol
    CNM01160
    Gene description
    signal transducer, putative
    Locus tag
    CNM01160
    See related
    FungiDB:CNM01160; VEuPathDB:CNM01160
    Gene type
    protein coding
    RNA name
    signal transducer, putative
    RefSeq status
    PROVISIONAL
    Organism
    Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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    Genomic context

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    See CNM01160 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    15
    Sequence:
    Chromosome: 13; NC_006682.1 (346322..352883, complement)

    Chromosome 13 - NC_006682.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene pseudo Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006682.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    signal transducer, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006682.1 Reference assembly

      Range
      346322..352883 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024658284.1 → XP_024514004.1  signal transducer, putative [Cryptococcus neoformans var. neoformans JEC21]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A225XHS2, Q5K7V4
      Conserved Domains (3) summary
      cd04435
      Location:476 → 564
      DEP_fRom2; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) Rom2-like proteins. Rom2-like proteins share a common domain architecture, containing, beside the RhoGEF domain, a DEP, a PH (pleckstrin homology) and a CNH ...
      pfam00621
      Location:661 → 840
      RhoGEF; RhoGEF domain
      cl02571
      Location:863 → 1620
      RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
    Nucleotide Protein
    Heading Accession and Version

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