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    PAN0_007c3185 translation initiation factor eIF-3 subunit 7 [ Moesziomyces antarcticus ]

    Gene ID: 26303957, updated on 29-Dec-2023

    Summary

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    Gene symbol
    PAN0_007c3185
    Gene description
    translation initiation factor eIF-3 subunit 7
    Locus tag
    PAN0_007c3185
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Moesziomyces antarcticus (strain: JCM 10317, type-material: type material of Sporobolomyces antarcticus)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces
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    Genomic context

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    See PAN0_007c3185 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_014639003.1Genomic Context describing neighboring genes Neighboring gene isy1-like splicing factor Neighboring gene vacuolar import and degradation protein Neighboring gene kinase-like protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_014639003.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft Genome Sequence of the Yeast Pseudozyma antarctica Type Strain JCM10317, a Producer of the Glycolipid Biosurfactants, Mannosylerythritol Lipids. Saika A, et al. Genome Announc, 2014 Sep 25. PMID 25291760, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translational initiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of eukaryotic translation initiation factor 3 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    translation initiation factor eIF-3 subunit 7
    XP_014656756.1
    • top hit is XP_757468.1 originated in Ustilago maydis 521

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_014639003.1 Reference assembly

      Range
      241367..243112
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014801270.1 → XP_014656756.1  translation initiation factor eIF-3 subunit 7 [Moesziomyces antarcticus]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A081CE73
      Conserved Domains (1) summary
      pfam05091
      Location:4 → 557
      eIF-3_zeta; Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
    Nucleotide Protein
    Heading Accession and Version

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