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    tespa1 thymocyte expressed, positive selection associated 1 [ Lepisosteus oculatus (spotted gar) ]

    Gene ID: 102683032, updated on 3-Dec-2024

    Summary

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    Gene symbol
    tespa1
    Gene description
    thymocyte expressed, positive selection associated 1
    See related
    Ensembl:ENSLOCG00000005735
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lepisosteus oculatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
    Orthologs
    human zebrafish all
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    Genomic context

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    See tespa1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_09 current fLepOcu1.hap2 (GCF_040954835.1) 1 NC_090696.1 (17906278..17924637, complement)
    101 previous assembly LepOcu1 (GCF_000242695.1) Linkage Group LG4 NC_023182.1 (14556793..14572862, complement)

    Chromosome 1 - NC_090696.1Genomic Context describing neighboring genes Neighboring gene Sp7 transcription factor Neighboring gene pleckstrin homology domain-containing family A member 3-like Neighboring gene TAR (HIV) RNA binding protein 2 Neighboring gene immunoglobulin superfamily, member 8 Neighboring gene protein FAM186B-like Neighboring gene sterol O-acyltransferase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables signaling receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein TESPA1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_040954835.1-RS_2024_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLepOcu1.hap2

    Genomic

    1. NC_090696.1 Reference fLepOcu1.hap2

      Range
      17906278..17924637 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015344197.2 → XP_015199683.1  protein TESPA1

      UniProtKB/TrEMBL
      W5MEX0
      Conserved Domains (1) summary
      pfam14722
      Location:137 → 293
      KRAP_IP3R_bind; Ki-ras-induced actin-interacting protein-IP3R-interacting domain

    2. XM_015344196.2 → XP_015199682.1  protein TESPA1

      UniProtKB/TrEMBL
      W5MEX0
      Related
      ENSLOCP00000006929.1
      Conserved Domains (1) summary
      pfam14722
      Location:137 → 293
      KRAP_IP3R_bind; Ki-ras-induced actin-interacting protein-IP3R-interacting domain

    3. XM_015344198.2 → XP_015199684.1  protein TESPA1

      UniProtKB/TrEMBL
      W5MEX0
      Conserved Domains (1) summary
      pfam14722
      Location:137 → 293
      KRAP_IP3R_bind; Ki-ras-induced actin-interacting protein-IP3R-interacting domain
    Nucleotide Protein
    Heading Accession and Version

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