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    ABFO07_RS29400 phytanoyl-CoA dioxygenase family protein [ Burkholderia stagnalis ]

    Gene ID: 93057417, updated on 27-Aug-2024

    Summary

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    Gene symbol
    ABFO07_RS29400
    Gene description
    phytanoyl-CoA dioxygenase family protein
    Locus tag
    ABFO07_RS29400
    Gene type
    protein coding
    Organism
    Burkholderia stagnalis (strain: YJ-2)
    Lineage
    Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
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    Genomic context

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    Location:
    plasmid: plas1

    NZ_CP156686.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene LysR family transcriptional regulator Neighboring gene ABC transporter substrate-binding protein Neighboring gene histidine utilization repressor Neighboring gene helix-turn-helix domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP156686.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Human phytanoyl-CoA hydroxylase: resolution of the gene structure and the molecular basis of Refsum's disease. Jansen GA, et al. Hum Mol Genet, 2000 May 1. PMID 10767344
    2. Functional expression of the ectoine hydroxylase gene (thpD) from Streptomyces chrysomallus in Halomonas elongata. Prabhu J, et al. Appl Environ Microbiol, 2004 May. PMID 15128576, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    phytanoyl-CoA dioxygenase family protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP156686.1 Reference assembly

      Range
      2835294..2836145
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_059879204.1 phytanoyl-CoA dioxygenase family protein [Burkholderia stagnalis]

      UniProtKB/TrEMBL
      A0A104VSP7
    Nucleotide Protein
    Heading Accession and Version