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    LOC110243038 SET domain-containing protein 5 [ Exaiptasia diaphana ]

    Gene ID: 110243038, updated on 22-Nov-2024

    Summary

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    Gene symbol
    LOC110243038
    Gene description
    SET domain-containing protein 5
    Locus tag
    AC249_AIPGENE25419
    See related
    EnsemblRapid:LOC110243038
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Exaiptasia diaphana
    Lineage
    Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Aiptasiidae; Exaiptasia
    Also known as
    Kmt2e
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    Genomic context

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    See LOC110243038 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    RS_2023_11 current Aiptasia genome 1.1 (GCF_001417965.1) Unplaced Scaffold NW_018386375.1 (174892..193279)

    NW_018386375.1Genomic Context describing neighboring genes Neighboring gene hemK methyltransferase family member 1 Neighboring gene high mobility group protein HMGI-C Neighboring gene uncharacterized LOC110243016 Neighboring gene 5-aminolevulinate synthase, nonspecific, mitochondrial Neighboring gene rhodopsin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_018386375 Unplaced Scaffold Reference Aiptasia genome 1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Developing the anemone Aiptasia as a tractable model for cnidarian-dinoflagellate symbiosis: the transcriptome of aposymbiotic A. pallida. Lehnert EM, et al. BMC Genomics, 2012 Jun 22. PMID 22726260, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SET domain-containing protein 5
    Names
    Histone-lysine N-methyltransferase 2E

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_001417965.1-RS_2023_11

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Aiptasia genome 1.1

    Genomic

    1. NW_018386375.1 Reference Aiptasia genome 1.1

      Range
      174892..193279
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028660260.1 → XP_028516061.1  SET domain-containing protein 5

      UniProtKB/TrEMBL
      A0A913YPF5
      Related
      XP_028516061.1, XM_028660260.1
      Conserved Domains (2) summary
      smart00317
      Location:311 → 421
      SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
      cd15550
      Location:67 → 110
      PHD_MLL5; PHD finger found in mixed lineage leukemia 5 (MLL5)
    Nucleotide Protein
    Heading Accession and Version

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