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Links from Protein Clusters

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    elongation factor Tu C-terminal domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840451, updated on 18-Sep-2024

    Summary

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    Official Full Name
    elongation factor Tu C-terminal domain-containing protein
    Primary source
    TAIR:AT1G35550
    Locus tag
    AT1G35550
    See related
    Araport:AT1G35550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15O4.37
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (13112506..13113136)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene auxin response factor 14 Neighboring gene ncRNA Neighboring gene TCP family transcription factor Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_103252.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    elongation factor Tu C-terminal domain-containing protein
    NP_174788.1
    • elongation factor Tu C-terminal domain-containing protein; FUNCTIONS IN: GTP binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT5G60390.3); Has 14582 Blast hits to 14579 proteins in 8354 species: Archae - 286; Bacteria - 0; Metazoa - 9702; Fungi - 2891; Plants - 516; Viruses - 0; Other Eukaryotes - 1187 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      13112506..13113136
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103252.3 → NP_174788.1  elongation factor Tu C-terminal domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174788.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WLU4, Q6NLF6
      Conserved Domains (1) summary
      PTZ00141
      Location:1 → 104
      PTZ00141; elongation factor 1- alpha; Provisional
    Nucleotide Protein
    Heading Accession and Version

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