U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein Clusters

    • Showing Current items.

    SCPL51 serine carboxypeptidase-like 51 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817336, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SCPL51
    Official Full Name
    serine carboxypeptidase-like 51
    Primary source
    TAIR:AT2G27920
    Locus tag
    AT2G27920
    See related
    Araport:AT2G27920
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    serine carboxypeptidase-like 51; T1E2.16; T1E2_16
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SCPL51 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    13
    Sequence:
    Chromosome: 2; NC_003071.7 (11885571..11889176, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Argonaute family protein Neighboring gene coiled-coil protein Neighboring gene PLATZ transcription factor family protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001036357.1
    NM_128351.3
    NM_201822.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    serine carboxypeptidase-like 51
    NP_001031434.1
    • serine carboxypeptidase-like 51 (SCPL51); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 48 (TAIR:AT3G45010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_565663.1
    • serine carboxypeptidase-like 51 (SCPL51); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 50 (TAIR:AT1G15000.1); Has 3757 Blast hits to 3498 proteins in 425 species: Archae - 0; Bacteria - 395; Metazoa - 679; Fungi - 928; Plants - 1340; Viruses - 0; Other Eukaryotes - 415 (source: NCBI BLink).
    NP_973551.1
    • serine carboxypeptidase-like 51 (SCPL51); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 48 (TAIR:AT3G45010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11885571..11889176 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128351.3 → NP_565663.1  serine carboxypeptidase-like 51 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565663.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q67Y83, Q680E1, Q945N4, Q9SJJ9
      UniProtKB/TrEMBL
      A0A178VZZ7, A0A5S9X250
      Conserved Domains (1) summary
      cl08270
      Location:36 → 452
      Peptidase_S10; Serine carboxypeptidase

    2. NM_001036357.1 → NP_001031434.1  serine carboxypeptidase-like 51 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031434.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q67Y83
      Conserved Domains (1) summary
      cl08270
      Location:48 → 385
      Peptidase_S10; Serine carboxypeptidase

    3. NM_201822.1 → NP_973551.1  serine carboxypeptidase-like 51 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973551.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VZZ7, A0A5S9X250, A8MR86
      Conserved Domains (1) summary
      cl08270
      Location:4 → 380
      Peptidase_S10; Serine carboxypeptidase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q67Y83.2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.