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Links from Protein Clusters

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    ZZ-type zinc finger protein, putative (DUF3755) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843144, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ZZ-type zinc finger protein, putative (DUF3755)
    Primary source
    TAIR:AT1G68160
    Locus tag
    AT1G68160
    See related
    Araport:AT1G68160
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T22E19.21; T22E19_21
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (25545758..25548894, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene zinc finger/BTB domain protein, putative (DUF1644) Neighboring gene WRKY DNA-binding protein 9 Neighboring gene nodulin MtN21 /EamA-like transporter family protein Neighboring gene RING/U-box superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Interplay of MYB factors in differential cell expansion, and consequences for tomato fruit development. Machemer K, et al. Plant J, 2011 Oct. PMID 21707804
    2. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_105486.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ZZ-type zinc finger protein, putative (DUF3755)
    NP_564923.1
    • Protein of unknown function (DUF3755); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G10820.2); Has 154 Blast hits to 154 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 145; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25545758..25548894 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105486.4 → NP_564923.1  ZZ-type zinc finger protein, putative (DUF3755) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564923.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WQT3, A0A654EMC8, Q8GZ67
      Conserved Domains (1) summary
      pfam12579
      Location:211 → 244
      DUF3755; Protein of unknown function (DUF3755)
    Nucleotide Protein
    Heading Accession and Version

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