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    E6A31_RS04260 GIY-YIG nuclease family protein [ Enterococcus faecium ]

    Gene ID: 66453859, updated on 3-Dec-2024

    Summary

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    Gene symbol
    E6A31_RS04260
    Gene description
    GIY-YIG nuclease family protein
    Locus tag
    E6A31_RS04260
    Gene type
    protein coding
    Organism
    Enterococcus faecium (strain: SRR24, nat-host: Homo sapiens)
    Lineage
    Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus
    Old locus tag
    E6A31_04590
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    Genomic context

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    NZ_CP038996.1Genomic Context describing neighboring genes Neighboring gene NAD(P)-dependent oxidoreductase Neighboring gene YkuJ family protein Neighboring gene MarR family transcriptional regulator Neighboring gene beta-ketoacyl-ACP synthase III

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP038996.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Catalytic domain structure and hypothesis for function of GIY-YIG intron endonuclease I-TevI. Van Roey P, et al. Nat Struct Biol, 2002 Nov. PMID 12379841
    2. Configuration of the catalytic GIY-YIG domain of intron endonuclease I-TevI: coincidence of computational and molecular findings. Kowalski JC, et al. Nucleic Acids Res, 1999 May 15. PMID 10219084, Free PMC Article
    3. Conserved domains in DNA repair proteins and evolution of repair systems. Aravind L, et al. Nucleic Acids Res, 1999 Mar 1. PMID 9973609, Free PMC Article
    4. Identification of a family of bacteriophage T4 genes encoding proteins similar to those present in group I introns of fungi and phage. Sharma M, et al. Proc Natl Acad Sci U S A, 1992 Jul 15. PMID 1631169, Free PMC Article
    5. Genomic confirmation of vancomycin-resistant Enterococcus transmission from deceased donor to liver transplant recipient. Bashir A, et al. PLoS One, 2017. PMID 28301471, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    GIY-YIG nuclease family protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP038996.1 Reference assembly

      Range
      882302..883267 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_002287608.1 MULTISPECIES: GIY-YIG nuclease family protein [Enterococcus]

      See identical proteins and their annotated locations for WP_002287608.1

      UniProtKB/TrEMBL
      A0A133CI66, A0A1E9VW79, A0A829EW18, A0A9P2S8Z4, A0AAV3DQC3, A0AAV3E012, A0AAV3GXB8, Q3Y0S9
      Conserved Domains (1) summary
      COG0322
      Location:2 → 218
      UvrC; Excinuclease UvrABC, nuclease subunit [Replication, recombination and repair]
    Nucleotide Protein
    Heading Accession and Version