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    LAB52_RS05135 CRISPR-associated helicase/endonuclease Cas3 [ Lactobacillus amylovorus GRL1118 ]

    Gene ID: 66523802, updated on 9-Apr-2023

    Summary

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    Gene symbol
    LAB52_RS05135
    Gene description
    CRISPR-associated helicase/endonuclease Cas3
    Locus tag
    LAB52_RS05135
    Gene type
    protein coding
    Organism
    Lactobacillus amylovorus GRL1118 (strain: GRL1118, nat-host: pig)
    Lineage
    Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
    Old locus tag
    LAB52_05085
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    Genomic context

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    Sequence:
    NC_017470.1 (1002745..1005477)

    NC_017470.1Genomic Context describing neighboring genes Neighboring gene 1-acyl-sn-glycerol-3-phosphate acyltransferase Neighboring gene hypothetical protein Neighboring gene type I-E CRISPR-associated protein Cse1/CasA Neighboring gene type I-E CRISPR-associated protein Cse2/CasB Neighboring gene type I-E CRISPR-associated protein Cas7/Cse4/CasC Neighboring gene type I-E CRISPR-associated protein Cas5/CasD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_017470.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of Lactobacillus amylovorus GRL1118, isolated from pig ileum. Kant R, et al. J Bacteriol, 2011 Jun. PMID 21478337, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    CRISPR-associated helicase/endonuclease Cas3

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_017470.1 Reference assembly

      Range
      1002745..1005477
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_014565810.1 CRISPR-associated helicase/endonuclease Cas3 [Lactobacillus amylovorus]

      See identical proteins and their annotated locations for WP_014565810.1

      Conserved Domains (3) summary
      PRK09694
      Location:12 → 868
      PRK09694; helicase Cas3; Provisional
      cd09641
      Location:24 → 233
      Cas3''_I; CRISPR/Cas system-associated protein Cas3''
      cl21455
      Location:311 → 711
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version