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    CCNL1 cyclin L1 [ Orcinus orca (killer whale) ]

    Gene ID: 101273415, updated on 8-Mar-2024

    Summary

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    Gene symbol
    CCNL1
    Gene description
    cyclin L1
    See related
    EnsemblRapid:ENSOORG00010007056
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Orcinus orca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
    Orthologs
    human mouse all
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    Genomic context

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    See CCNL1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 5 NC_064563.1 (42032584..42046102, complement)

    Chromosome 5 - NC_064563.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117197482 Neighboring gene leucine, glutamate and lysine rich 1 Neighboring gene 60S ribosomal protein L35-like Neighboring gene uncharacterized LOC125964383 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064563.1 Chromosome 5 Reference mOrcOrc1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cyclin-L1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mOrcOrc1.1 Primary Assembly

    Genomic

    1. NC_064563.1 Reference mOrcOrc1.1 Primary Assembly

      Range
      42032584..42046102 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004281825.4 → XP_004281873.1  cyclin-L1

      Related
      ENSOORP00010008535.1, ENSOORT00010010263.1
      Conserved Domains (2) summary
      smart00385
      Location:208 → 284
      CYCLIN; domain present in cyclins, TFIIB and Retinoblastoma
      cd00043
      Location:85 → 157
      CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...

    RNA

    1. XR_007477360.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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