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    LOC110872288 phosphatidylinositol 4-kinase alpha 1 [ Helianthus annuus (common sunflower) ]

    Gene ID: 110872288, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC110872288
    Gene description
    phosphatidylinositol 4-kinase alpha 1
    Locus tag
    HanXRQr2_Chr03g0110121
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Helianthus annuus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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    Genomic context

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    See LOC110872288 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    101 current HanXRQr2.0-SUNRISE (GCF_002127325.2) 3 NC_035435.2 (110647572..110664218)
    100 previous assembly HanXRQr1.0 (GCF_002127325.1) Linkage Group 8 NC_035440.1 (29119730..29136387, complement)

    Chromosome 3 - NC_035435.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110870899 Neighboring gene uncharacterized LOC110869682 Neighboring gene ATP-dependent DNA helicase PIF1-like Neighboring gene uncharacterized LOC110869680

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 1-phosphatidylinositol 4-kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phosphatidylinositol phosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phosphatidylinositol-mediated signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidylinositol 4-kinase alpha 1
    Names
    putative 1-phosphatidylinositol 4-kinase
    putative phosphatidylinositol 3- and 4-kinase family protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Helianthus annuus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HanXRQr2.0-SUNRISE Primary Assembly

    Genomic

    1. NC_035435.2 Reference HanXRQr2.0-SUNRISE Primary Assembly

      Range
      110647572..110664218
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022121061.2 → XP_021976753.1  phosphatidylinositol 4-kinase alpha 1 isoform X2

      Conserved Domains (2) summary
      cd05167
      Location:1706 → 2005
      PI4Kc_III_alpha; Catalytic domain of Type III Phosphoinositide 4-kinase alpha
      cl00271
      Location:1466 → 1645
      PI3Ka; Phosphoinositide 3-kinase family, accessory domain (PIK domain); PIK domain is conserved in PI3 and PI4-kinases. Its role is unclear, but it has been suggested to be involved in substrate presentation. Phosphoinositide 3-kinases play an important role in ...

    2. XM_022121060.2 → XP_021976752.1  phosphatidylinositol 4-kinase alpha 1 isoform X1

      UniProtKB/TrEMBL
      A0A251U4P7
      Conserved Domains (2) summary
      cd05167
      Location:1707 → 2006
      PI4Kc_III_alpha; Catalytic domain of Type III Phosphoinositide 4-kinase alpha
      cl00271
      Location:1467 → 1646
      PI3Ka; Phosphoinositide 3-kinase family, accessory domain (PIK domain); PIK domain is conserved in PI3 and PI4-kinases. Its role is unclear, but it has been suggested to be involved in substrate presentation. Phosphoinositide 3-kinases play an important role in ...
    Nucleotide Protein
    Heading Accession and Version

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