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    his-39 Histone H2A/H2B/H3 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 191681, updated on 9-Dec-2024

    Summary

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    Official Symbol
    his-39
    Official Full Name
    Histone H2A/H2B/H3 domain-containing protein
    Primary source
    WormBase:WBGene00001913
    Locus tag
    CELE_F45F2.2
    See related
    AllianceGenome:WB:WBGene00001913
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Orthologous to human H2BK1 (H2B.K variant histone 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See his-39 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    1
    Sequence:
    Chromosome: V; NC_003283.11 (8536513..8536716)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Histone H3 Neighboring gene Histone H4 Neighboring gene OToPetrin-Like Neighboring gene Major facilitator superfamily (MFS) profile domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nicotinic acetylcholine receptors in the nematode Caenorhabditis elegans. Ballivet M, et al. J Mol Biol, 1996 May 3. PMID 8627624
    2. A modular network model of aging. Xue H, et al. Mol Syst Biol, 2007. PMID 18059442, Free PMC Article
    3. The Caenorhabditis elegans histone hairpin-binding protein is required for core histone gene expression and is essential for embryonic and postembryonic cell division. Pettitt J, et al. J Cell Sci, 2002 Feb 15. PMID 11865041
    4. Caenorhabditis elegans ALG-1 antimorphic mutations uncover functions for Argonaute in microRNA guide strand selection and passenger strand disposal. Zinovyeva AY, et al. Proc Natl Acad Sci U S A, 2015 Sep 22. PMID 26351692, Free PMC Article
    5. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of nucleosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Histone H2A/H2B/H3 domain-containing protein
    NP_505201.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      8536513..8536716
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_072800.5 → NP_505201.3  Histone H2A/H2B/H3 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22979
      Conserved Domains (1) summary
      cl23830
      Location:1 → 66
      H2B; Histone H2B
    Nucleotide Protein
    Heading Accession and Version

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