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    CXD86_RS09635 sigma-54 dependent transcriptional regulator [ Bordetella pertussis ]

    Gene ID: 69601769, updated on 1-Aug-2024

    Summary

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    Gene symbol
    CXD86_RS09635
    Gene description
    sigma-54 dependent transcriptional regulator
    Locus tag
    CXD86_RS09635
    Gene type
    protein coding
    Organism
    Bordetella pertussis (strain: H640, nat-host: Homo sapiens)
    Lineage
    Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella
    Old locus tag
    CXD86_09590
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    Genomic context

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    NZ_CP025371.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene TadG family pilus assembly protein Neighboring gene DUF2968 domain-containing protein Neighboring gene DUF1178 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP025371.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The History of Bordetella pertussis Genome Evolution Includes Structural Rearrangement. Weigand MR, et al. J Bacteriol, 2017 Apr 15. PMID 28167525, Free PMC Article
    2. Signal sensing by sigma 54-dependent regulators: derepression as a control mechanism. Shingler V. Mol Microbiol, 1996 Feb. PMID 8830233

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    sigma-54 dependent transcriptional regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP025371.1 Reference assembly

      Range
      1979189..1980580
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_003820229.1 MULTISPECIES: sigma-54 dependent transcriptional regulator [Bordetella]

      See identical proteins and their annotated locations for WP_003820229.1

      UniProtKB/TrEMBL
      A0A0T7CLD3, A0A381A2J5, A0AAI9J5U5, Q7VX22
      Conserved Domains (1) summary
      COG2204
      Location:114 → 455
      AtoC; DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains [Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version